euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

174 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip548 chr1 42483965 42483965 + unknown germline . no 229 HIVEP3
srip661 chr1 49428746 49428746 - unknown germline . no 229 AGBL4
srip2397 chr1 90914505 90914505 + unknown germline . no 229 .
srip3187 chr1 105028221 105028221 + unknown germline . no 229 .
srip3734 chr1 119150068 119150068 - unknown germline . no 229 .
srip4114 chr1 149308428 149308428 + unknown germline . no 229 LOC645262
srip6855 chr1 221827812 221827812 - unknown germline . no 229 .
srip6992 chr1 225272510 225272510 + unknown germline . no 229 DNAH14
srip7468 chr1 249191467 249191467 + unknown germline . no 229 .
srip7688 chr10 9525639 9525639 + unknown germline . no 229 .
srip7826 chr10 19065791 19065791 - unknown germline . no 229 .
srip9581 chr10 68949319 68949319 + unknown germline . no 229 CTNNA3
srip9703 chr10 76230337 76230337 . unknown germline . no 229 ADK
srip9806 chr10 82972200 82972200 . unknown germline . no 229 .
srip10814 chr10 108075913 108075913 - unknown germline . no 229 .
srip11493 chr10 122662184 122662184 + unknown germline . no 229 WDR11
srip14242 chr11 41831803 41831803 - unknown germline . no 229 .
srip14419 chr11 42376729 42376729 - unknown germline . no 229 .
srip15375 chr11 58171843 58171843 + unknown germline . no 229 .
srip17473 chr11 103138813 103138813 - unknown germline . no 229 DYNC2H1
srip17485 chr11 104040181 104040181 + unknown germline . no 229 .
srip17655 chr11 104556129 104556129 - unknown germline . no 229 .
srip18055 chr11 110377885 110377885 - unknown germline . no 229 .
srip18130 chr11 111082407 111082407 . unknown germline . no 229 .
srip18232 chr11 112084613 112084613 + unknown germline . no 229 BCO2
srip18324 chr11 119327946 119327946 - unknown germline . no 229 LOC100499227
srip18346 chr11 121131527 121131527 . unknown germline . no 229 .
srip18630 chr11 129531124 129531124 + unknown germline . no 229 .
srip19260 chr11 134305645 134305645 - unknown germline . no 229 .
srip19905 chr12 11219195 11219195 - unknown germline . no 229 PRH1-PRR4
srip20131 chr12 12933687 12933687 - unknown germline . no 229 APOLD1
srip20743 chr12 28226420 28226420 - unknown germline . no 229 .
srip22226 chr12 43256979 43256979 - unknown germline . no 229 .
srip23136 chr12 66451381 66451381 . unknown germline . no 229 .
srip24627 chr12 84965140 84965140 + unknown germline . no 229 .
srip24901 chr12 85506283 85506283 + unknown germline . no 229 LRRIQ1
srip25100 chr12 95808453 95808453 - unknown germline . no 229 .
srip26272 chr12 126802925 126802925 - unknown germline . no 229 .
srip27350 chr13 27488117 27488117 + unknown germline . no 229 .
srip28243 chr13 49521720 49521720 + unknown germline . no 229 .
srip29647 chr13 61734491 61734491 . unknown germline . no 229 .
srip29746 chr13 64569846 64569846 - unknown germline . no 229 .
srip30965 chr13 79259790 79259790 - unknown germline . no 229 .
srip31449 chr13 85871603 85871603 - unknown germline . no 229 .
srip33523 chr13 104296230 104296230 - unknown germline . no 229 .
srip34586 chr14 26787474 26787474 . unknown germline . no 229 .
srip35222 chr14 28301256 28301256 + unknown germline . no 229 .
srip36761 chr14 43668860 43668860 - unknown germline . no 229 .
srip37208 chr14 59160892 59160892 + unknown germline . no 229 .
srip37869 chr14 67419872 67419872 - unknown germline . no 229 GPHN
srip38286 chr14 72333714 72333714 - unknown germline . no 229 .
srip40234 chr15 47507335 47507335 - unknown germline . no 229 SEMA6D
srip42518 chr15 83551627 83551627 - unknown germline . no 229 HOMER2
srip42979 chr15 98199976 98199976 + unknown germline . no 229 .
srip43569 chr16 6793827 6793827 + unknown germline . no 229 RBFOX1
srip46327 chr16 71028016 71028016 + unknown germline . no 229 HYDIN
srip46400 chr16 76865783 76865783 - unknown germline . no 229 .
srip46526 chr17 4314992 4314992 - unknown germline . no 229 .
srip46823 chr17 15511186 15511186 + unknown germline . no 229 CDRT1
srip47753 chr17 33135418 33135418 - unknown germline . no 229 .
srip48880 chr18 12491257 12491257 + unknown germline . no 229 SPIRE1
srip48986 chr18 15095260 15095260 - unknown germline . no 229 .
srip50023 chr18 49216225 49216225 - unknown germline . no 229 .
srip51613 chr18 74515281 74515281 - unknown germline . no 229 LOC100131655
srip51833 chr18 74960069 74960069 - unknown germline . no 229 .
srip52349 chr19 29223829 29223829 . unknown germline . no 229 .
srip52750 chr2 6798282 6798282 - unknown germline . no 229 .
srip53091 chr2 20076852 20076852 - unknown germline . no 229 FLJ12334
srip53469 chr2 23191008 23191008 - unknown germline . no 229 .
srip53922 chr2 35879345 35879345 + unknown germline . no 229 .
srip56228 chr2 82098041 82098041 + unknown germline . no 229 .
srip56520 chr2 83188332 83188332 + unknown germline . no 229 .
srip59222 chr2 147020926 147020926 + unknown germline . no 229 .
srip59274 chr2 151744039 151744039 + unknown germline . no 229 .
srip61235 chr2 201638076 201638076 + unknown germline . no 229 AOX2P
srip61630 chr2 212707189 212707189 + unknown germline . no 229 ERBB4
srip64034 chr20 25895497 25895497 - unknown germline . no 229 .
srip64778 chr20 41952105 41952105 - unknown germline . no 229 .
srip65538 chr21 14390189 14390189 - unknown germline . no 229 .
srip65856 chr21 19517305 19517305 - unknown germline . no 229 .
srip66288 chr21 23626197 23626197 - unknown germline . no 229 .
srip66932 chr21 29069180 29069180 + unknown germline . no 229 .
srip67132 chr21 40769614 40769614 . unknown germline . no 229 WRB
srip67497 chr22 22486374 22486374 - unknown germline . no 229 IGL@
srip70554 chr3 21234921 21234921 + unknown germline . no 229 .
srip71080 chr3 26524455 26524455 - unknown germline . no 229 .
srip71322 chr3 30419386 30419386 - unknown germline . no 229 .
srip72713 chr3 55788574 55788574 + unknown germline . no 229 ERC2
srip73791 chr3 75101217 75101217 + unknown germline . no 229 .
srip73922 chr3 75728590 75728590 - unknown germline . no 229 .
srip76124 chr3 98775492 98775492 - unknown germline . no 229 .
srip77258 chr3 123590719 123590719 + unknown germline . no 229 MYLK
srip77495 chr3 131069773 131069773 + unknown germline . no 229 LOC339874
srip78157 chr3 143121760 143121760 - unknown germline . no 229 SLC9A9
srip79871 chr3 169269958 169269958 + unknown germline . no 229 MECOM
srip79969 chr3 173755702 173755702 - unknown germline . no 229 NLGN1
srip80232 chr3 175677977 175677977 - unknown germline . no 229 .
srip80341 chr3 176091324 176091324 + unknown germline . no 229 .
srip80866 chr3 181192836 181192836 + unknown germline . no 229 .
srip81479 chr3 186372132 186372132 + unknown germline . no 229 .
srip82980 chr4 18162684 18162684 - unknown germline . no 229 .
srip83540 chr4 23129614 23129614 . unknown germline . no 229 .
srip84065 chr4 40966462 40966462 + unknown germline . no 229 APBB2
srip84710 chr4 47007787 47007787 - unknown germline . no 229 .
srip85066 chr4 49221427 49221427 . unknown germline . no 229 .
srip85377 chr4 57497059 57497059 - unknown germline . no 229 .
srip86419 chr4 68265631 68265631 + unknown germline . no 229 .
srip87345 chr4 80768540 80768540 + unknown germline . no 229 GDEP
srip88313 chr4 98917746 98917746 + unknown germline . no 229 C4orf37
srip89612 chr4 110248324 110248324 - unknown germline . no 229 .
srip91599 chr4 132181655 132181655 - unknown germline . no 229 .
srip92810 chr4 138177329 138177329 + unknown germline . no 229 .
srip93228 chr4 147953943 147953943 - unknown germline . no 229 .
srip93715 chr4 154595621 154595621 - unknown germline . no 229 .
srip93875 chr4 158907280 158907280 - unknown germline . no 229 .
srip95388 chr4 190659702 190659702 + unknown germline . no 229 .
srip96981 chr5 23070277 23070277 + unknown germline . no 229 .
srip97737 chr5 33633341 33633341 - unknown germline . no 229 ADAMTS12
srip99497 chr5 68263467 68263467 - unknown germline . no 229 .
srip100739 chr5 89450775 89450775 + unknown germline . no 229 .
srip101079 chr5 96866415 96866415 + unknown germline . no 229 .
srip101496 chr5 104573572 104573572 - unknown germline . no 229 .
srip101688 chr5 105935368 105935368 + unknown germline . no 229 .
srip103600 chr5 135023720 135023720 . unknown germline . no 229 .
srip103779 chr5 137014782 137014782 - unknown germline . no 229 KLHL3
srip104214 chr5 144331004 144331004 - unknown germline . no 229 .
srip106769 chr6 10914842 10914842 - unknown germline . no 229 SYCP2L
srip107525 chr6 13503042 13503042 + unknown germline . no 229 .
srip108169 chr6 39219886 39219886 . unknown germline . no 229 .
srip108717 chr6 46310300 46310300 + unknown germline . no 229 .
srip109126 chr6 57494221 57494221 - unknown germline . no 229 PRIM2
srip110329 chr6 73716085 73716085 + unknown germline . no 229 KCNQ5
srip110526 chr6 75339292 75339292 + unknown germline . no 229 .
srip111054 chr6 77980645 77980645 - unknown germline . no 229 .
srip112044 chr6 91669514 91669514 - unknown germline . no 229 .
srip112702 chr6 102283763 102283763 - unknown germline . no 229 GRIK2
srip113128 chr6 117395491 117395491 + unknown germline . no 229 .
srip113225 chr6 123647635 123647635 + unknown germline . no 229 TRDN
srip113793 chr6 142450104 142450104 - unknown germline . no 229 .
srip114430 chr6 148163578 148163578 + unknown germline . no 229 .
srip114779 chr6 148195806 148195806 + unknown germline . no 229 .
srip115674 chr6 162181261 162181261 + unknown germline . no 229 PARK2
srip116299 chr7 17094708 17094708 + unknown germline . no 229 .
srip117904 chr7 57768892 57768892 - unknown germline . no 229 LOC100287663
srip119681 chr7 84901723 84901723 - unknown germline . no 229 .
srip120245 chr7 85044744 85044744 + unknown germline . no 229 .
srip120529 chr7 90331914 90331914 - unknown germline . no 229 .
srip120776 chr7 93146619 93146619 - unknown germline . no 229 CALCR
srip121748 chr7 107829256 107829256 + unknown germline . no 229 NRCAM
srip122002 chr7 108325669 108325669 + unknown germline . no 229 .
srip122274 chr7 110484750 110484750 + unknown germline . no 229 IMMP2L
srip124062 chr8 4452901 4452901 - unknown germline . no 229 CSMD1
srip124383 chr8 5829282 5829282 - unknown germline . no 229 .
srip124755 chr8 8474919 8474919 - unknown germline . no 229 .
srip125597 chr8 25503657 25503657 - unknown germline . no 229 .
srip125777 chr8 40433181 40433181 - unknown germline . no 229 ZMAT4
srip126444 chr8 62115153 62115153 + unknown germline . no 229 NPM1P6
srip126890 chr8 67381884 67381884 - unknown germline . no 229 .
srip127345 chr8 72399223 72399223 - unknown germline . no 229 .
srip128450 chr8 92186274 92186274 - unknown germline . no 229 LRRC69
srip128837 chr8 111632616 111632616 + unknown germline . no 229 .
srip129140 chr8 115788572 115788572 - unknown germline . no 229 .
srip129647 chr8 119721690 119721690 . unknown germline . no 229 SAMD12-AS1
srip131367 chr9 7741401 7741401 + unknown germline . no 229 .
srip132359 chr9 30495885 30495885 - unknown germline . no 229 .
srip132565 chr9 30674459 30674459 - unknown germline . no 229 .
srip133403 chr9 32463891 32463891 - unknown germline . no 229 DDX58
srip134041 chr9 74904917 74904917 - unknown germline . no 229 .
srip134213 chr9 82082785 82082785 - unknown germline . no 229 .
srip135088 chr9 105073661 105073661 + unknown germline . no 229 .
srip135998 chr9 118083883 118083883 . unknown germline . no 229 DEC1
srip137238 chrX 54917144 54917144 + unknown germline . no 229 .
srip138348 chrX 66982762 66982762 - unknown germline . no 229 .
srip141072 chrX 122664864 122664864 - unknown germline . no 229 .